NEWS
nandb 2.1.0 (2021-05-16)
MINOR IMPROVEMENTS
- No more messages from
ijtiff
I/O.
BUG FIXES
- Insist on bug-fixed
autothresholdr
.
nandb 2.0.8 (2021-04-21)
BUG FIXES
- Insist on bug-fixed
filesstrings
>= 3.2.
- Remove
LazyData
from DESCRIPTION
(was causing CRAN note).
nandb 2.0.7 (2020-05-08)
BUG FIXES
- Cope with
ijtiff
not working on 32-bit Windows.
nandb 2.0.6 (2020-03-16)
BUG FIXES
nandb 2.0.5 (2019-08-22)
BUG FIXES
skip_on_cran()
tests that allow for different C++ <random>
implementations (doing these on Travis, AppVeyor and R-hub is enough).
nandb 2.0.4 (2019-07-08)
BUG FIXES
- Exclude a test on CRAN oldrel.
- Insist on latest, bug-fixed
ijtiff
v2.0.2.
nandb 2.0.3 (2019-06-28)
BUG FIXES
- Fix tests on CRAN Solaris and Windows oldrel.
- Insist on latest, bug-fixed
filesstrings
v3.1.5.
nandb 2.0.2 (2019-06-17)
BUG FIXES
- Insist on new
filesstrings
. Old filesstrings
was wreaking havoc on nandb
due to its incompatibility with older versions of strex
. See https://github.com/rorynolan/strex/issues/2.
nandb 2.0.1 (2019-05-31)
BUG FIXES
- Require necessary versions of
glue
and filesstrings
and newest, least buggy ijtiff
, autothresholdr
and detrendr
.
nandb 2.0.0 (2018-11-11)
MAJOR CHANGES
- Robin Hood detrending is now used instead of exponential smoothing detrending. This is a breaking change.
NEW FEATURES
- The
timeseries
functions now have the option to overlap
for better time resolution.
- A
pkgdown
website!
nandb 1.1.0
NEW FEATURES
matrix_raster_plot()
is back. I thought it didn't really fit but a user said they missed when it was gone so it's back now.
nandb 1.0.1 (2018-05-08)
BUG FIXES
- Fix issues on CRAN linux devel clang.
nandb 1.0.0 (2018-04-27)
NEW FEATURES
- The package is now peer-reviewed and published in the journal Bioinformatics. See
citation("nandb")
.
- The package style is now in accordance with the tidyverse style guide.
brightness()
and number()
now include options to set offset
, S-factor, readout_noise
and gamma
correction terms.
brightness()
and number()
now enable calculation of both definitions ("B" and "epsilon"; "N" and "n") of brightness and number.
- Detrending is outsourced to the
detrendr
package. This new package makes detrending more accurate and much faster.
- TIFF I/O and graphics
display()
are now outsourced to the ijtiff
package. This means R users no longer have to tell nandb
how many channels are in the images.
- The package now has its own S3 class system.
BUG FIXES
- Kmer calculations are no longer possible. The way in which they were done was over-simple.
nandb 0.2.1 (2017-07-11)
BUG FIXES
- Compatible with
filesstrings
1.1.0.
nandb 0.2.0 (2017-05-29)
- The first version that I consider CRAN-worthy.